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Getting Started
Why Paidiverpy?
Installation
Usage
Package Organisation
Configuration File
Images Metadata
How we handle the images
Preprocessing Steps
Colour Layer
Sampling Layer
Convert Layer
Position Layer
Custom Layer
Example Data
Graphical User Interface (GUI)
Gallery
Scientific Background
Position/size-based processing
Colour/content-based processing
Benchmarks
User Guide
Performance
Custom Algorithm
Remote Data
Image Formats
Rename Images
Validate and Export Metadata
Test Mode
Help & Reference
Contributing to paidiverpy
CLI and Docker Reference
API Reference
paidiverpy
paidiverpy.colour_layer
paidiverpy.colour_layer.colour_layer
paidiverpy.config
paidiverpy.config.config_params
paidiverpy.config.configuration
paidiverpy.convert_layer
paidiverpy.convert_layer.convert_layer
paidiverpy.custom_layer
paidiverpy.custom_layer.custom_layer
paidiverpy.frontend
paidiverpy.frontend.app
paidiverpy.frontend.json_dump
paidiverpy.frontend.parse
paidiverpy.frontend.render
paidiverpy.frontend.widgets
paidiverpy.images_layer
paidiverpy.investigation_layer
paidiverpy.investigation_layer.investigation_layer
paidiverpy.metadata_parser
paidiverpy.metadata_parser.ifdo_tools
paidiverpy.metadata_parser.metadata_parser
paidiverpy.models
paidiverpy.models.colour_params
paidiverpy.models.config_model
paidiverpy.models.convert_params
paidiverpy.models.custom_params
paidiverpy.models.general_config
paidiverpy.models.open_params
paidiverpy.models.position_params
paidiverpy.models.sampling_params
paidiverpy.models.step_config
paidiverpy.open_layer
paidiverpy.open_layer.open_layer
paidiverpy.open_layer.utils
paidiverpy.paidiverpy
paidiverpy.pipeline
paidiverpy.pipeline.pipeline
paidiverpy.pipeline.pipeline_params
paidiverpy.position_layer
paidiverpy.position_layer.position_layer
paidiverpy.sampling_layer
paidiverpy.sampling_layer.sampling_layer
paidiverpy.utils
paidiverpy.utils.base_model
paidiverpy.utils.benchmark
paidiverpy.utils.data
paidiverpy.utils.docker
paidiverpy.utils.exceptions
paidiverpy.utils.formating_html
paidiverpy.utils.install_packages
paidiverpy.utils.locals
paidiverpy.utils.logging_functions
paidiverpy.utils.object_store
paidiverpy.utils.parallellisation
paidiverpy.utils.schema_json_handler
paidiverpy.utils.static
Repository
Open issue
paidiverpy.utils.static.html
paidiverpy.utils.static.html
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Static HTML files for paidiverpy.
